MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus capitis
GW2.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 35
bases: 2,450,181 bps
CDS: 2,288
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,362
Total number of protein coding genes annotated/found:
2,288
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5007|JADGMA010000034.1
SEQF5007_00030
Genome Viewer
NA
AA
1059/353
2902-3960
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00031
Genome Viewer
NA
AA
1458/486
4104-5561
Membrane-bound lytic murein transglycosylase F
SEQF5007|JADGMA010000034.1
SEQF5007_00032
Genome Viewer
NA
AA
723/241
5554-6276
Glutamine transport ATP-binding protein GlnQ
SEQF5007|JADGMA010000034.1
SEQF5007_00033
Genome Viewer
NA
AA
1128/376
6436-7563
Epoxyqueuosine reductase
SEQF5007|JADGMA010000034.1
SEQF5007_00034
Genome Viewer
NA
AA
471/157
7566-8036
tRNA (cytidine(34)-2'-O)-methyltransferase
SEQF5007|JADGMA010000034.1
SEQF5007_00035
Genome Viewer
NA
AA
600/200
8216-8815
Glucosamine-6-phosphate deaminase
SEQF5007|JADGMA010000034.1
SEQF5007_00036
Genome Viewer
NA
AA
180/60
8843-9022
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00037
Genome Viewer
NA
AA
399/133
9209-9607
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00038
Genome Viewer
NA
AA
1386/462
9761-11146
Fumarate hydratase class II
SEQF5007|JADGMA010000034.1
SEQF5007_00039
Genome Viewer
NA
AA
831/277
12074-11244
Ribosomal large subunit pseudouridine synthase D
SEQF5007|JADGMA010000034.1
SEQF5007_00040
Genome Viewer
NA
AA
1113/371
12250-13362
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00041
Genome Viewer
NA
AA
624/208
13382-14005
Response regulator protein VraR
SEQF5007|JADGMA010000034.1
SEQF5007_00042
Genome Viewer
NA
AA
465/155
14254-14718
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00043
Genome Viewer
NA
AA
1131/377
14939-16069
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00044
Genome Viewer
NA
AA
345/115
16141-16485
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00045
Genome Viewer
NA
AA
1197/399
16890-18086
putative metallophosphoesterase YhaO
SEQF5007|JADGMA010000034.1
SEQF5007_00046
Genome Viewer
NA
AA
2940/980
18076-21015
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00047
Genome Viewer
NA
AA
942/314
21012-21953
3'-5' exoribonuclease YhaM
SEQF5007|JADGMA010000034.1
SEQF5007_00048
Genome Viewer
NA
AA
1002/334
23404-22403
Foldase protein PrsA
SEQF5007|JADGMA010000034.1
SEQF5007_00049
Genome Viewer
NA
AA
570/190
24175-23606
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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